FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467831
Sequences flagged as poor quality0
Sequence length41
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTAC9910.21182863042423442No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTA8900.19023963781792996No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAG7610.16266557795443226No Hit
GGACTGGTCCGGCAGGGTATCCGGGAAAGCCGCACGTGCCG7280.15561174868702587No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT7070.1511229482441309No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCC6830.14599289059510806No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATT5340.11414378269075799No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)