FastQCFastQC Report
Sun 21 May 2023
EGAF00007925160

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925160
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467831
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22780.48692797185308373No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG19140.4091220975095708No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT17360.37107416994598474No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC7540.16116931114013394No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA7440.15903178711970775No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6950.1485579194196195No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT6810.14556538579102282No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT4860.10388366739271233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)