FastQCFastQC Report
Wed 31 May 2023
EGAF00007925164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472249
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21560.4565388174458813No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG20370.43134024635308915No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT17190.3640028883068042No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC7400.15669699671148057No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6860.1452623510055077No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA6840.14483884560899016No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT6490.13742750116993366No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)