FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465381
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24360.5234420829384956No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG10630.2284149976041136No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT10330.2219686665334425No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC7010.15062926935134868No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCTGG7010.15062926935134868No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT6780.14568708219716747No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6110.1312902761393353No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT5540.11904224710506016No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5500.11818273629563734No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA5250.11281079373674473No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)