FastQCFastQC Report
Wed 31 May 2023
EGAF00007925218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469791
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23330.4966038089277998No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG10840.230740903933877No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT10120.2154149398349479No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7470.1590068775263894No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC6880.14644810138976694No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCTGG6820.14517093771485617No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6350.13516648892805525No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA6110.1300578342284122No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT5940.12643920381616505No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5550.11813763992924514No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)