FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences520515
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG30320.5825000240146778No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24200.46492416164759903No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG12160.2336147853568101No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT12070.23188572855729422No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC11700.22477738393706231No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG10500.20172329327685082No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA9870.18961989568023976No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC8600.16522098306484925No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC8310.1596495778219648No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7870.1511964112465539No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAACAG7820.15023582413571177No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT7800.1498515892913749No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAACAG7760.14908311960270115No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT7480.14370383178198515No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC7390.1419747749824693No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTGGT7250.13928513107211127No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA7120.1367876045839217No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCCAG7110.13659548716175327No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTGGC6650.1277580857420055No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAACTG6060.11642315783406819No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG5970.11469410103455231No Hit
ATGTGCGAAGACACCATCACCTACGAATGTCCG5960.1145019836123839No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAGAA5950.11430986619021545No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA5830.1120044571241943No Hit

[OK]Adapter Content

Adapter graph