FastQCFastQC Report
Sun 21 May 2023
EGAF00007925236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456678
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTATT21850.4784552792120487No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21730.47582760719806955No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG19070.4175808775548636No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC12220.26758460009021673No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT11220.2456873333070566No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)