FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences483238
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG18840.38987000194521126No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT11600.2400473472698753No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC10710.22162992148796246No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10350.21418017622786287No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG8430.17444820150733178No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA7590.15706546256709944No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT6840.14154515994189198No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT6760.1398896609952032No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAATCT6640.13740641257517No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT6540.135337038891809No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC6490.13430235205012853No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG6420.1328537904717758No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC6130.1268526067900289No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAATCC6100.12623179468502063No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC5860.12126529784495425No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAGAT5850.12105836047661815No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCGCG5810.12023061100327374No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5790.11981673626660155No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATCCG5690.11774736258324055No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA5660.11712655047823226No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5650.11691961310989615No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATCCA5110.10574499521974678No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5080.10512418311473849No Hit

[OK]Adapter Content

Adapter graph