FastQCFastQC Report
Wed 31 May 2023
EGAF00007925256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451494
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21580.47796869947330417No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG14110.31251799580946815No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT10020.22192985953301703No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7060.1563697413476148No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5320.11783102322511484No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG5150.11406574616716944No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC5090.11273682485260048No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT4530.10033355924995681No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)