FastQCFastQC Report
Sun 21 May 2023
EGAF00007925257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences470064
Sequences flagged as poor quality0
Sequence length41
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGCAGGCACCGCGACGACGACGGGACGGTGGTGGGGTCG6600.1404064127437966No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTG5650.12019639878825011No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT4930.10487933557983595No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGG4820.10253922870077266No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTA4770.10147554375574391No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)