FastQCFastQC Report
Sun 21 May 2023
EGAF00007925258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences470064
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG9920.21103509309370638No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAACGC6290.13381156608461828No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC5540.11785629190918684No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5520.11743081793117534No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5250.11168691922802002No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC4930.10487933557983595No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT4830.10275196568977842No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG4810.1023264917117669No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC4760.10126280676673814No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)