FastQCFastQC Report
Wed 31 May 2023
EGAF00007925260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455788
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22010.4828999447111376No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG10450.2292732586202357No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAACGC5960.13076254750015356No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC5390.11825673339359527No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5060.11101652522664046No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC4750.1042151175546526No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT4670.10245991557478477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)