FastQCFastQC Report
Sun 21 May 2023
EGAF00007925262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences470876
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG9710.2062114017278434No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAACGC6360.13506740628105915No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC6290.13358081533142485No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5300.11255617190088262No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5300.11255617190088262No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT5240.11128195108691034No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC4740.10066344430380823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)