FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457712
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22470.4909200545321075No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG9920.21673017093718322No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAACGC5790.126498759044989No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC5550.1212552871674765No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT4890.10683573950431711No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG4860.10618030551962805No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC4820.10530639354004265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)