FastQCFastQC Report
Sun 21 May 2023
EGAF00007925276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469465
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22250.473943744475094No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG16020.3412394960220677No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT8690.18510432087589063No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG7880.1678506384927524No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCACC6230.1327042484530263No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA5830.1241839114736988No Hit
GAAGAGGAAGATGACGACTCCAGCGATACTGGT5180.11033836388229154No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)