FastQCFastQC Report
Sun 21 May 2023
EGAF00007925278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481616
Sequences flagged as poor quality0
Sequence length33
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG28530.5923806518055879No Hit
CGTCGTCGTTCCGAACTGCGCGATTACGGCGAC10410.21614730407627653No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT9200.19102355403474966No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5330.1106690807614365No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC4830.10028736586824359No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)