FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455661
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG42920.9419283195182383No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT32440.7119327745846145No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC19590.4299248783635202No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT19300.42356049782623484No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG16540.3629891520231049No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC14890.3267780213799294No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCGGT14370.31536602869238317No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC13940.30592918858537377No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC13290.291664197725941No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA10880.238774000847121No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTCGT9930.21792516805256537No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCCGC8000.17556911826994193No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCTTC7390.16218197300185883No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTGAA7340.16108466601267168No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGTTC7110.15603705386241087No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6730.14769752074458864No Hit
GGCCTGACTTCTTATGATGAACCGCTGGTTACC6330.13891906483109154No Hit
TCTACCGAAAGCGTTGACAAAAACTTTGTTGTG5540.12158161440193477No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT5510.12092323020842248No Hit
TCTCCGCCGCGCCGTCCGCCGCCGGGTCGTCGT5340.11719238644518622No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT5340.11719238644518622No Hit
TCCTACACCAACGGCAAACTGACTATCACCCCG5340.11719238644518622No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5040.1106085445100634No Hit
GAAGCAACTATCAAAAAAGAACAGAAGCTGATC4960.108852853327364No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTACC4880.10709716214466457No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCTAC4650.10204954999440373No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)