FastQCFastQC Report
Sun 21 May 2023
EGAF00007925322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511162
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG83061.6249251704938943No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17630.3449004425211577No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6480.1267699868143563No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6460.12637872142295398No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5800.11346696350667694No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5470.10701108454853844No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5340.10446785950442325No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)