FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925336

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925336
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516311
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG87501.6947150070403303No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12040.23319278496874946No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9190.17799349616800728No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCG6850.13267197483687157No Hit
ACCACTCCGACGAAAAGCCACTTCGCAAACC5930.11485325704856182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)