FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences550476
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT31880.5791351484896708No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG27050.49139290359616045No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14810.2690398854809292No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9700.17621113363707044No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7170.13025091012142218No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5720.10391007055711783No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)