FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559655
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33180.592865247339879No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18950.33860145982792966No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13260.23693168112497875No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9840.17582260499772182No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8050.1438386148609411No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)