FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences493353
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG26370.5345057190287684No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9690.1964110890173973No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9440.1913437234596729No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6210.1258733604538738No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5690.11533324009380706No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4970.10073922728756084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)