FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504787
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18430.36510448961641245No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10260.2032540457658379No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9930.19671663493711208No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5970.11826770499240274No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5810.11509805125726295No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5570.1103435706545533No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)