FastQCFastQC Report
Sun 21 May 2023
EGAF00007925396

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925396
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429996
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG58931.3704778649103713No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13250.3081424013246635No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6980.16232709141480386No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5070.117908073563475No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)