FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925410

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925410
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences393669
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG56601.4377560844262565No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14030.3563907749911728No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8060.2047405307504528No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6840.17375002857730734No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6380.1620650851349738No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5290.13437684958683563No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5070.1287883983752848No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4680.11888159850026292No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4160.1056725320002337No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4150.10541851149061775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)