FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447446
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62781.4030743374619508No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10710.23935849242143187No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9840.21991480536198782No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7740.1729817676322953No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC7390.16515959467734653No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5040.11263929055126205No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4860.10861645874585985No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)