FastQCFastQC Report
Sun 21 May 2023
EGAF00007925422

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925422
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences430153
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59671.3871808403056587No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11780.27385604656947643No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC7250.1685446806136421No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7200.16738230350596184No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6550.15227140110611806No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6330.14715694183232478No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6240.14506466303850024No Hit
GCCCTGATGCAGGCATACGGCGGCGGTGGTT6000.13948525292163486No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5660.1315810885894089No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5290.12297949799257472No Hit
TGGCGCCCTGCCCCGTGGACCCCGAACCCGC4790.11135572691577184No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)