FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438985
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG58881.3412758978097201No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT25720.5858970124263927No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12810.2918095151314965No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG10470.23850473250794446No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6750.1537637960294771No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6370.14510746380855838No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6290.14328507807783863No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6110.13918471018371925No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5710.1300727815301206No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4930.11230452065560327No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4830.1100265384922036No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG4660.1061539688144242No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG4610.10501497773272436No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)