FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466133
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64631.3865141493951298No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28130.6034758320050286No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC15410.3305923416707249No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG14090.30227424361716504No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10620.2278319707036404No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10120.21710541841062528No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC9390.20144465206282328No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT8800.18878732035706547No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA8280.17763170597232977No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8190.17570092655958708No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT7690.164974374266572No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT7290.15639313243215994No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6950.14909907687290966No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6920.14845548373532874No Hit
ATGTCCAACATGGACATCGATGGTATTAACA6920.14845548373532874No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG6620.1420195523595197No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC6170.13236565529580613No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5550.11906473045246743No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG4850.1040475572422463No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC4800.10297490201294479No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG4750.10190224678364329No Hit
GGTCGTCAGGGCTCCGACGTCGAGCTGGAAA4680.10040052946262118No Hit

[OK]Adapter Content

Adapter graph