FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925462

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925462
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences471264
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG66891.4193742785360224No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29380.6234297548720038No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC15110.3206270795138182No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG14450.3066221905343926No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10840.23001969172268621No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10730.22768554355944862No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC9170.19458307869898825No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA9060.19224893053575065No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT8750.18567087662117202No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA8490.1801537991444286No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT7700.16339037142663135No Hit
ATGTCCAACATGGACATCGATGGTATTAACA7540.1599952468255585No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7290.15469036463638214No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT7130.1512952400353093No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC7070.15002206830990697No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6600.14004888979425545No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC6150.13050010185373803No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC5670.12031472805051945No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC5160.1094927683845997No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC4750.10079276159435052No Hit

[OK]Adapter Content

Adapter graph