FastQCFastQC Report
Sun 21 May 2023
EGAF00007925482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences452449
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47951.0597879540014454No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG14250.3149526244946944No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12990.28710418190779513No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG12110.2676544759740877No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC9640.21306268772834067No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT9450.20886331940174474No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA9390.20753720308808285No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7260.16046007395308642No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7170.15847089948259363No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC7140.15780784132576267No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6810.15051420160062237No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6720.14852502713012958No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG6020.13305367013740776No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5540.12244473962811278No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5520.12200270085689216No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5170.11426702236053124No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT4740.10476318877928784No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4680.10343707246562596No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG4630.1023319755375744No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)