FastQCFastQC Report
Sun 21 May 2023
EGAF00007925488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439845
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22030.5008582568859485No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19350.4399277018040446No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15000.34102922620468573No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9700.2205322329456968No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7950.18074548988848343No Hit
CTGCGTGTCTGCGCTGCGCTGTCCATCCCGA7320.16642226238788665No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6690.15209903488728985No Hit
CAGACCCCGGAACAGAGCACCCCGTCCCGCA5040.11458582000477441No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)