FastQCFastQC Report
Sun 21 May 2023
EGAF00007925496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464493
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG52011.1197154747219011No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16130.34726034622696145No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC16050.34553803824815443No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC12410.2671730252124359No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC9870.21248974688531366No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG9050.1948360901025419No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC8740.1881621466846648No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC7970.17158493238864742No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7800.16792502793368252No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG7120.15328541011382305No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6670.14359742773303363No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6420.13821521529926176No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6130.1319718488760864No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6040.13003425239992852No Hit
GCACTGGTAAGCGCTATGGAACGTACTGAAC5850.1259437709502619No Hit
CGCGAAATGATCCGTTATATGGCACTGGTTT5720.12314502048470052No Hit
CAGGGTGCCCTGACTCTGAGCCTGCCGAAAC5540.11926982753238477No Hit
GCTCTGACCCTGAGCCTGCCGAAACAGCAGG5270.11345703810391114No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5210.1121653071198059No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5190.11173473012510415No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG4940.10635251769133226No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4790.10312319023106915No Hit

[OK]Adapter Content

Adapter graph