FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925500

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925500
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441789
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47301.0706468472506105No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29920.677246377795735No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA26680.6039082005210633No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15320.34677187526172No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12190.275923574376003No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA11210.2537410392744048No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA9330.2111867882631754No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8770.19851105391940496No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7350.16636901326198705No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7220.16342643207504035No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6880.15573045050917972No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6770.15324057412022482No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6590.1491662309382986No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6060.13716955379151585No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC5930.13422697260456914No Hit
CCGAAGAAAAACCGTAAACCGAAGCCACCGA5750.13015262942264294No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5680.12856816262967163No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5650.12788910543268395No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5630.12743640063469214No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG5320.1204194762658192No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC5310.1201931238668233No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5020.11362890429594218No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG4960.11227078990196676No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG4860.11000726591200777No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4500.10185857954815535No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)