FastQCFastQC Report
Sun 21 May 2023
EGAF00007925502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437743
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT50651.1570716150800813No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49311.1264600461914867No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA23860.545068681852137No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC14550.332386811439589No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10400.2375823257025241No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7930.18115652334817461No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC5110.11673516195575943No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4950.11308004925264367No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)