FastQCFastQC Report
Wed 31 May 2023
EGAF00007925506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences419273
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45041.0742404113787436No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6500.15503025475048476No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5460.1302254139904072No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5370.12807884123232355No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5150.12283166337923024No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4940.11782299361036842No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4550.10852117832533933No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)