FastQCFastQC Report
Sun 21 May 2023
EGAF00007925508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426096
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45801.0748751455071157No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT41990.9854586759791222No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18950.44473545867597913No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG17380.4078893019413466No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG13850.325044121512523No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13420.3149524989673688No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG12850.30157523187262963No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG11810.27716758664714053No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8580.20136307311028498No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG7480.1755472945064023No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7450.17484322781720552No Hit
ACCGATTGCGACCTGGATCCGATGGAAGGCA7000.1642822274792535No Hit
ATTGAGCAGAAACAGCTGCTGCAGGGTGATG6760.1586496939656791No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6370.14949682700612069No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5770.13541549322218469No Hit
CAGAAACAGCTGCTGCAGGGTGACGTGGAAG5410.12696669295182306No Hit
GTTGCACGCGTCGCCGACACCCTGCCAACGG5370.12602793736622733No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5270.123681048402238No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC4770.11194660358229132No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4760.11171191468589238No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4270.10021215876234463No Hit

[OK]Adapter Content

Adapter graph