FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences416061
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43981.0570565373827394No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33250.799161661390998No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13930.3348066749827549No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12220.2937069323969322No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG10120.24323356430907966No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7360.17689713767933066No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7080.170167355267617No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6500.15622709170049584No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5610.13483599760612025No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5410.13002901016918192No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4880.11729049346129534No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG4240.10190813366309268No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)