FastQCFastQC Report
Wed 31 May 2023
EGAF00007925520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417622
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44391.0629229303053958No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT35670.8541216698354014No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14960.3582186762191647No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10450.2502262811825048No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9680.231788555200636No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7070.16929184765170419No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG6780.1623477690351562No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6210.14869906278883774No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6150.14726235686817266No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6130.1467834548946176No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC5940.14223388614584478No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5680.13600816048962938No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5580.1336136506218542No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5460.13074023878052402No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG5430.13002188582019147No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5070.12140165029620087No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5020.12020439536231328No Hit
CCGCTGATTCGTCACGAAAACCGTATGGTTC4810.11517592463998544No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG4590.10990800293088007No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)