FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522294
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15450.29581040563360866No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14570.2789616576104646No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13720.26268729872447316No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8090.15489360398549476No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7040.13478998418515242No Hit
CTGCGTGTCTGCGCTGCGCTGTCCATCCCGA6110.11698392093342064No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5750.11009125128758898No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)