FastQCFastQC Report
Sun 21 May 2023
EGAF00007925542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences530394
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17090.32221329803881643No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14710.2773409955617899No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12990.24491227276326658No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8470.15969260587412376No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7420.13989600184014148No Hit
CTGCGTGTCTGCGCTGCGCTGTCCATCCCGA6290.11859108511785578No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5690.10727873995558018No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)