FastQCFastQC Report
Sun 21 May 2023
EGAF00007925544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences507031
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43610.8601052006682036No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17490.3449493226252438No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13210.2605363380148354No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7660.15107557526068427No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7090.13983365908593362No Hit
CTGCGTGTCTGCGCTGCGCTGTCCATCCCGA5610.1106441223514933No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5560.10965798935370817No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)