FastQCFastQC Report
Sun 21 May 2023
EGAF00007925568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences532649
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22130.41547060071454184No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16030.3009486547426166No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14420.2707223706418298No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7460.14005470769681347No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6920.12991669936487257No Hit
GTGGTAGAAATGGAGGGTTACCGTTACGTGG6520.12240706356343484No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5940.11151809165135013No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)