FastQCFastQC Report
Wed 31 May 2023
EGAF00007925570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences507367
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43540.8581559305197224No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22230.4381443806948422No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13710.2702185991599769No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7550.14880747072631842No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6910.13619332751243185No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5810.11451276886356423No Hit
GTGGTAGAAATGGAGGGTTACCGTTACGTGG5560.10958536917063981No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)