FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516310
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42150.8163700102651508No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24990.48401154345257696No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15340.2971083263930584No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7000.13557746315198232No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6300.1220197168367841No Hit
GTGGTAGAAATGGAGGGTTACCGTTACGTGG5670.1098177451531057No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5420.10497569289767775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)