FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007925597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510875
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10550.20650844139955957No Hit
GTTCTGGGACGCAGCCATGTAGTCCTGCGGTGCCGCACGACGCT9380.18360655737704917No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT5690.11137753853682408No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT5660.1107903107413751No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC5480.10726694396868118No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG5270.10315634940053829No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)