FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007925614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences435425
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46761.0738933226158351No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14070.32313257162542347No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12920.29672159384509383No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9730.22345983808922318No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6560.15065740368605385No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6190.14215995866107825No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5890.1352701383705575No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5800.13320319228340127No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5230.12011253373141184No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4910.11276339208818971No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4490.10311764368146063No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)