FastQCFastQC Report
Sun 21 May 2023
EGAF00007925622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451954
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23470.5193006367904698No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10840.23984741810007212No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10090.2232528089141815No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7430.16439726166822288No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7220.1597507710961735No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6770.14979400558463915No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5530.1223575850639667No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5360.11859614031516483No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5270.11660478721285795No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4930.10908189771525421No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)