FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences413865
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44821.0829618353811026No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15910.38442487284500987No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14390.3476979208195909No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA13040.3150785884285938No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8450.20417285829920384No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7810.18870887849902748No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG7760.18750075507713868No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7690.18580938228649438No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6960.1681707803269182No Hit
GTGGTAGAAATGGAGGGTTACCGTTACGTGG6540.15802254358305245No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6240.15077380305171978No Hit
CTGTCTGCTGAGCAGCTGAACGTCACTGACG6200.14980730431420874No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG6150.14859918089231997No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5630.13603469730467665No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5470.13216870235463254No Hit
TCTACCGAAAGCGTTGACAAAAACTTTGTTG5170.12491996182329987No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4950.11960421876698925No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4700.11356360165754534No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT4560.11018085607625676No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4310.10414023896681286No Hit
TATCACCAGAACCAGGGTGAAAACATTTCCA4260.10293211554492407No Hit
CACGAAGCTCCGAACATGACCCAGACCGGTA4240.10244886617616857No Hit

[OK]Adapter Content

Adapter graph