FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007925646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007925646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences444432
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22720.5112143140007921No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11530.2594322641033949No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7610.17122979443424416No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5380.12105338949490586No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4840.10890304928537999No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)